Coding

Part:BBa_K593008:Experience

Designed by: Ceren Seref   Group: iGEM11_METU-Ankara   (2011-09-21)


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Applications of BBa_K593008

User Reviews

UNIQ4bce64521c2c2eba-partinfo-00000000-QINU UNIQ4bce64521c2c2eba-partinfo-00000001-QINU

iGEM Braunschweig 2014

1. Results of sequencing
After transformation of the BioBrick BBa_K593004 and cultivation in E. coli the plamid DNA was isolated. We determined the nucleotide sequence of the BioBrick BBa_K593008 by use of sequencing techniques. The alignment of BBa_K593008 with the original sequence of mmoC fromMethylococcus capsulatus shows that they differed significantly (see Fig.1).

Fig. 1 Alignment of BBa_K593008 and the original sequence of mmoC from M. capsulatus.

The tested BioBrick does not contain the sequence of mmoC. The DNA sequence is without any distinct function. A further characterization of the BioBrick BBa_K593008 was impossible. We were not able to perform any expression studies or activity tests with this BioBrick.


2. Improvement
Our new BioBrick BBa_K1390002 contains the original sequence of mmoC from Methylococcus capsulatus, as shown in the alignment of our new Brick and the original sequence from Methylococcus capsulatus (see Fig.2).

Fig. 2 Alignment of BBa_K139002 and the original sequence of mmoC from M. capsulatus.